VAT reports group transactions together based on the VAT code assigned to transactions. Therefore, any transaction entered without a VAT code will not appear on VAT reports. If you delete a VAT code from an entry, the entry will not appear on VAT reports.
You can use the Company Data Auditor to identify transactions entered without a VAT code or where the VAT amount has been manually changed for a transaction. For more information, see Run the Company Data Auditor.
You can make an adjustment to a VAT report by creating a nominal journal entry—for more information, see AccountEdge Help.
Alternatively, you can enter the correct details on your VAT return and keep detailed records of how the difference between your software reports and your VAT return is calculated. You will be asked to produce this by HM Revenue & Customs during any VAT audit visit.